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Clinical Fact Documentation Input File (PCORnet)

Source: R/data.R
cfd_input_pcornet.Rd

A sample version of an PCORnet compliant input file for the Clinical Fact Documentation data quality module. This exact file is also included as a CSV in the package if the user wishes to use it, or the structure can be copied to produce a custom list of checks.

Usage

cfd_input_pcornet

Format

cfd_input_pcornet

A dataframe or CSV file with 5 columns

check_id

A short string "code" used to identify the specific check (ex: dr_admin, dr_rx)

check_description

A longer description of the check (ex: full med_admin table, full prescribing table)

schema

The schema where the data is kept. Use cdm to use the pre-configured cdm_schema, result to use the preconfigured results_schema, or input the exact name of the schema.

table

The name of the CDM or pre-computed results table where the relevant data is kept

filter_logic

OPTIONAL The logic that should be applied to the provided table in order to tailor the tables to the desired check assessment (ex: if you only want to assess billed procedures)